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Hi,
Th plugin does not seem to working using this type of stitching.
It load all the files well, or at least no error pops up, but the output image is the first image replicated and stitched toget…
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In #132 the `BaseFOV.root` returns a `pathlib.Path` object and `__eq__` compares the paths of two FOVs to check if they are the same. This assumes that an FOV always has a single path. However in OME-…
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LIF (Leica Image File) is the native file format of the [LAS X](https://www.leica-microsystems.com/products/microscope-software/p/leica-las-x-ls/) microscope software by [Leica Microsystems CMS GmbH](…
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Instead of the nopixels flag currently employed for selecting companion files, we will shift to a using bit masks that can store multiple flags if necessary.
This will allow for expansion and flexibi…
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Hello,
The issue is not really a bug just me not figuring out your workflow. How is the *.mrx import towards Omero supposed to be conducted. I know there is a Importer Python Script importer for …
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Dear MCMICRO developers,
I am trying to run MCMICRO in my windows machine, through the WSL subsystem, and it is creating some permission problems.
I am now just trying to run the Exemplar_001, ho…
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Hi @Tom-TBT, cc @joshmoore @jburel
This repo is based on the same idea I had for omero-figure at https://github.com/ome/omero-figure/pull/366/files which is to add an omero cli plugin command for…
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We currently use the suffix to determine the type of files. However, some images have double suffix names e.g. ome.tiff. Also users may use the wrong extension for a particular file.
As a first ins…
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Reviving this old issue on input inference:
We should revisit this in the context of the image list that could store metadata like available channels per Zarr, available labels & tables, number of py…
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Hi all. Ran into a small issue trying to create a config with 2 OME-Zarrs (i'm using latest version on pypi). My code that worked for multiple OME-TIFFs doesn't work.
### AttributeError with `Multi…