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We currently tag "Oct-4", "Sep-4", and "May-4" (maybe others too) as entities. Grounding finds some id as well. At least for "May-4" it is incorrect (it uses the string "4").
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In https://github.com/dhimmel/biorxiv-licenses/issues/1, we've been discussing the formatting/encoding of [`biorxiv/biorxiv.txt`](https://github.com/OmnesRes/prepub/blob/a1c8b1230a012f6d8d4025761f01f9…
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ssb1 has
DNA unwinding involved in DNA replication
is that the correct term (wouldn't that imply it was a helicase?)
It seems that it is more
"While Ssb1 is known to stabilize DNA strand separation,…
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> ?existing.CytoscapeWindow
> # RCy3 help window is working
>
> cool4.filt.w Error: could not find function "existing.CytoscapeWindow"
> cool4.filt.w Error: could not find function "existing.Cy…
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Hi,
I've installed Interpro on my Mac OS X and have attempted to execute a test run from my terminal as follows:
$ ./interproscan.sh -f TSV -i ~/Documents/interproscan-5.18-57.0/test_proteins_new.fa…
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```
$ TransDecoder.Predict
No transcript file (-t)
NAME
Transdecoder - Transcriptome
Protein Prediction
USAGE
Required:
-t transcripts.fasta
Comm…
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Name: MF: PTB domain binding
Definition: Interacting selectively with a
phosphotyrosine binding (PTB) domain of a protein (PFAM
PF02174.5)
Parent term: protein domain specific binding (GOID:0019904)
S…
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Suggested new term : protein phosphatase type 7
activity
Synonyms: Protein phosphatase with EF calcium-binding
domain (PPEF)
Definition: Catalysis of the reaction: a phosphoprotein +
H2O = a prote…
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- [x] Train model with GENIA corpus
- [x] Test performance (with test set or otherwise CV)
- [ ] 2x confirm that training code for GnormPlus is not available
- [ ] Try training with [Moara](http://moa…
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```
> What steps will reproduce the problem?
Import a search-GUI result (the issue happens for both omx and t.xml result
files). Hard to attach, since they are at least 100 MB.
> What is the expect…