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Hi,
I wonder what configuration and object looked like for these objects? https://cells.ucsc.edu/?ds=multimodal-pbmc+sct
We have a gene expression + CITE-seq data for several objects, and we'd lik…
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* **PTHR ID & PTN node:**
GO:0004042 | acetyl-CoA:L-glutamate N-acetyltransferase activity | IBA with S000004666 , PTN000559455
* **Sequences with problematic annotation (ID + gene/protein nam…
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- [x] populate membranes with proteins that have defined `TM-Section` material
- [x] move linearly through verts
- [ ] move randomly through verts
- [ ] move through faces
- [ ] filter by face normals…
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Currently have the % of shared residues and % of shared proteins between CATH superfamilies and Pfam Clans, and CATH superfamilies and Pfam families.
One example of these results is for `http://daw…
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Hello,
Thank you for developing this great tool.
We noticed the hover text is not displaying for certain proteins in the aggregated_features_pca_tsne.html file. This issue appears to occur in larg…
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Dear authors of cellphoneDB, first of all, thanks for this very very useful tool!
I am using it to evaluate ligand-receptor interactions among different annotated cell type a scRNAseq dataset.
I am …
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Try to find proteins (that are not enzymes) in organism pathways, starting from Uniprot ID, and using KEGG KO database.
pkrog updated
4 years ago
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Hello,
I'm doing some work that requires me to find up and down-regulated proteins. Is there a way to extract the proteins selected from either of the volcano plots and export them into a text file …
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Hi everyone,
I'm using Microbeannotator to re-annotate some plasmid proteins I've got in a Prokka.faa file. As I built the database with diamond method, I launch microbeannotator with the same method…