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- [x] change `is_staff` check to is belong to `bioinormatics` group
- [x] user who own the seqs can click submit
- [x] user from bioinormatics` group can click in every place
User groups
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http://epigenomics.sdsc.edu:8000/setqc/610/
clicking not generate qsub job
wrong 10xprocessed in '.Set_580.txt'
empty .Set_580_samplesheet.tsv
```
cat /projects/ps-epigen/outputs/setQCs/.Set_58…
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Hello ensembl-vep community,
Is there a possibility to define a regulatory variants in melanoma or melanocyte specific cell line?
I tried to list the available cell types in vep 96 but melanocyt…
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Hi,
I'm trying to use your software to build model based on melo epigenomics data. I'm binarized my bam file and I performed the model with the learnModel command.
Now, I'm trying to used this m…
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Here is a list (via Marcos) of the current repositories indexed by BioCaddie. The number of datasets in each repo is shown between brackets. This list could be useful for us to identify target reposit…
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http://epigenomics.sdsc.edu:8000/setqc/617/
error msg:
```
[24/Sep/2019 09:30:21] "GET /setqc/allsets/ HTTP/1.1" 200 915401
explist: ['ATAC-seq', 'ATAC-seq', 'ATAC-seq', 'ATAC-seq']
[24/Sep/20…
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**Bioconductor**
* SCDE ✔ colname="Z" is the Z-score. Scde only compares between cell types. This is not what I'm after, but could include it for completeness.
* MAST ✔ colname = "Pr(>Chisq)" is the…
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Hi,
Thanks for this useful tool:
```r
library(ENCODExplorer)
data(encode_df, package = "ENCODExplorer")
query_results_melanocyte query_results_melanocyte
Empty data.table (0 rows) of 73 col…
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Hello,
I met a problem with Arriba. Before using it on my samples I'm testing it and other tools on test dataset (positive, negative & real breast line cancer, paired-end data).
It appears that I …
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