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Hi! Great project!
After getting dependencies installed, the download went without errors. But I'm wondering about the result...
https://link.springer.com/search?facet-content-type=%22Book%22&…
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when splitting clusters using feature projection, the split always seems to be a time cut off
in addition to that, the clusters which appear to be distinct, are still present after cutting.
this h…
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Could we replace our custom support for each batch scheduler (and batch scheduler job submission via the shell: `qsub` etc.) with generic use of the DRMAA?
From [wikipedia](https://en.wikipedia.or…
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Hello!
What for do we have to use [bam-readcount](https://github.com/genome/bam-readcount)? If I am right, varscan already gets this info from input BAMs and stores it in it's VCF!
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The scrapped 2017 orgs projects.
```
{
"52°North Initiative for Geospatial Open Source Software GmbH": 1,
"AboutCode": 4,
"AerospaceResearch.net": 6,
"aimacode": 4,
"Amahi": 3,
"AO…
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Hi Jeff,
Thank you for the development of Parasail. It is an outstanding piece of software.
It seems that Parasail is not applying a gap extend penalty when we open gaps in the sequence.
My wo…
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Hello!
I have been trying out NanoCLUST for 16S analysis of a few of my data and it has been wonderful so far.
But, a few datasets always abort during read_correction.
Even though I have 47 GB …
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### Description of the bug
I am attempting to run the ampliseq pipeline on a single sample to test it on my system. I get an error that says:
```
ERROR ~ No such variable: outfile
```
Is there an is…
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Erez would like stats to pop up when looplists are loaded (or some good way of viewing looplist stats), including:
- Number of loops
- Number of anchors
- Number/percent of loops with known motifs
- N…
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5: What are our teachers made of, and how can we find them
6: Work on the paper.