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### Operating System
Windows 10
### Other Linux
_No response_
### Workflow Version
v2.5.0
### Workflow Execution
EPI2ME Desktop application
### EPI2ME Version
v2.5.0
### CLI command run
_No…
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Hello,
I have a problem with preparation BAM files form Pod5 for new model training. I tried to align reads against a reference using both bonito and dorado using the following commands:
bonito b…
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Hello.
I was trying to assemble a genome with mira, and the process got killed for some reason (probably the server ran out of memory). When I tried to resume the assembly from a checkpoint by using…
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Thank you for developing flye. When I was assembling a plant genome of about 300M using flye, I encountered the error message: "ERROR: No disjointigs were assemble". How can I fix it? Looking forward …
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### Description of the bug
Dear all,
Thanks a lot for this wonderful tool.
I am processing shallow coverage WGS data with oncoanalyser through nf-core and experiencing an issue at the GRIDSS st…
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Hi Seqan-Team,
I have tested the ability of IBF to store many small protein sequences. I use the alphabet `seqan3::aa27`, the inserted sequences are not very long (maximum `13556` amino acids), b…
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Hi @ploy-np ,
Can you give more details on how to understand the final results in *diffmod.table*?
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Hi,
I followed your guide and I successfully preprocessed my eventalign files of my two conditions.
I have one repeat per condition.
Then I run the command
xpore diffmod --config $CONFIGFILE/my_c…
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I use the 'Walkthrough: scripts only.' option (Version:0.11.3), and my command is:
`singularity exec clockwork_v0.11.3.img clockwork variant_call_one_sample --sample_name ./ERR4822319 ./Ref.H37Rv …
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Hi,
I have some HG002 long reads that I have error-corrected to almost short-read quality - https://gist.github.com/jelber2/02fdca09ed3b12b650b512ba200f3b67
I was wondering if there might be a…