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As discussed [here](https://github.com/OBOFoundry/COB/issues/42#issuecomment-684181008), lets start the certainly painful discussion on where in the COB hierarchy phenotype (the biological condition, …
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Why does this variant associated with phenotypes
https://beta.monarchinitiative.org/phenotype/HP:0002149#variant
but this one doesn't
https://beta.monarchinitiative.org/variant/ClinVarVariant:549…
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Can you share the processed genotype and phenotype data?
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This isn't a bug, it's a question or a discussion item.
By learning multiple transformations from a reference (REF) group (for example, young and healthy individuals) to a target (TAR) group (for…
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Hello developers,
MARRVEL has released a new tool called MARRVELAI. This tool integrates phenotype data to prioritize variants, a feature currently missing in Scout's variant ranking. MARRVELAI can…
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Running the following code with model selection = true gives the following errors and does not produce the BIC files. The same input files will produce output without model selection = true for the mu…
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See #56
Is it useful to be able to query for eg. NOT high temperature?
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Hi!
Are the NK cells in the output of quantiseq, activated NK cells or resting/inactive NK cells?
Is the NK cell data used for "training" quantiseq made of active NK cells or resting?
Thank you i…
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It would be nice to have a test mode/development mode available to be able to run the pipeline from end to end with a small set of phenotypes, say 10 or 100 phenotypes per species, just to facilitate …
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Hello,
You mention in the Building Environment section that a binary phenotype is required.
Does that mean quantitative phenotypes are not supported?
If so, do you have any plans to include the…
sinog updated
3 years ago