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(De)compression streams are now supported in all web browsers: https://developer.mozilla.org/en-US/docs/Web/API/DecompressionStream
Pako is pretty fat and slow. There's also [fflate](https://github…
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
v1.4.0
### Workflow Execution
EPI2ME Desktop (Local)
### Other workflow execution
_No response_
### EPI2M…
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I'm working on a Linux based HPC working with private data hence the environment is restrictive (no internet connection); therefore packages must be built from source.
After downloading the file an…
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Hi,
I am using lumpyexpress (LUMPY 0.2.13) on a collection of bams. I've mapped reads and extracted discordant pairs and split reads using bwa and samtools as suggested in the readme (speedseq wo…
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Please consider applying these three patches from new Debian package.
https://salsa.debian.org/med-team/vt/-/tree/8d7a6047a9b5ecb846da38a0175ec394758eef8c/debian/patches
* makefile: Get rid of e…
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Would it be possible to support files compressed with [bgzip](http://www.htslib.org/doc/tabix.html)? Here's the [link](https://github.com/samtools/htslib/blob/develop/htslib/bgzf.h) to source code. Th…
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Hi there,
My python verion is 2.7.11. I installed pysamstats from github master directly after installing pysam-0.15.1.
I got the following error. What do you think might be the problem and how…
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VCF files that are filtered using bcftools and have their data compressed by specifying `-O z` as part of the command can't be imported into R because of the error "scanBcfHeader(bf) : [internal] _hts…
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Make gzp usable as C library and/or python module
For example, there is a python wrapper around [ISA-L](https://github.com/intel/isa-l)` which uses the `igzip` code to provide fast gzip decompress…
ghuls updated
3 years ago
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Hi, I encountered such an error! Could you please provide the missing file? Thanks.
```
Load the assembly pseudochromosomes that have a CRISPR array and a Cas9[¶](http://222.200.186.124:9111/noteboo…