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Hi there,
I'm trying to run 4x phospho enriched and 4x global samples in DIA-NN (1.8.2 beta 39) but i am not sure if DIA-NN is bugged or if its still searching and taking a long time.
From what …
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My Maxquant analysis runs well then it fails at the Writing tables stage. What could be causing this problem? My fasta file was constructed by myself. Errors are as below,
Configuring
Assemble run…
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Hi,
I am trying to run a quantification analyses using artMS and get the following error:
```Error: Assigned data `dfdc.final[[x]] - dfdc.final[[y]]` must be compatible with existing data```
T…
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Hi all,
I can't understanding why all the peptides are quantified to zero intensity when using labile-phosphor default workflow despite the flag ionquant.run-ionquant=true in the workflow file. (W…
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Dear Dr. Hajk-Georg Drost
Recently, I used one of your programs named "LTRpred".
I keep getting this error in the Join solo LTR Copy Number Estimation table after Finished LTR CNV estimation…
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Hello Fengchao and team,
I have performed a sample prep which uses both isotopic and isobaric labeling to essentially multiply the multiplexing capabilities. Specifically, for isotopic labeling I h…
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Title: A pan-coronavirus fusion inhibitor targeting the HR1 domain of human coronavirus spike
## Please paste a link to the paper or a citation here:
Link: https://doi.org/10.1126/sciadv.aav…
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hi Michael
Please forgive me for bringing this up again... In my defense: You said nothing is preventing users from converting .d folders to mzml and analyze diaPASEF data :)
I have tried a few …
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Dear Vadim,
I hope you are well. I have used your software successfully many times for SWATH data. This is my first time using it for diaPASEF data. I initially loaded it up with variable mods in th…
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Given the new `OnDiskMSnExp` infrastructure, it is time to upgrade the `quantify` method. I am considering the following signature (only focusing on the most important arguments for now):
```r
quant…