-
## Proposal: A built-in Go error check function, `try`
**This proposal has been [closed](https://github.com/golang/go/issues/32437#issuecomment-512035919). Thanks, everybody, for your input.**
B…
-
**Describe the issue**
![image](https://user-images.githubusercontent.com/42739946/167596078-b4f74cf1-7ec7-4a7d-a679-2595007cc87b.png)
I ran RepeatMasker using a mixture library deriving from de…
-
Output from a recent test run (funannotate version 1.7.4) below...
Program | Training-Method
------- | ---------------
augustus | pretrained
genemark | selftraining
glimmerhmm | busco
snap | b…
-
Hello,
I've been trying to run PALMER on my data and it seems to work fine mostly, creating a big number of "chr" folders. However, at some point it throws the following error:
terminate called aft…
-
awk: fatal: cannot open file `/home/gnomeadmin/te_analysis/dnaPipeTE/dnaPipeTE//Trinity_run0/chrysalis/readsToComponents.out.sort' for reading (No such file or directory)
sed: can't read /home/gnomea…
-
Hello,
I use GenomeScope2 to determine the genome size of _A. thaliana_ with Illumina and HiFi reads. I got a close estimate with Illumina data; however, I am a bit puzzled with the HiFi outcome.
…
-
This task depends on [this issue](https://github.com/Bioconductor/GenomeInfoDb/issues/49) being completed first (i.e. PR accepted and merged, and issue closed). Although it's not a requirement that th…
-
HI,
I use TEtranscripts for 30 kinds of tissue, the data was Paired-end, I don't know what kind of data should I put in control sample, what's the function of --control?Can I use Hisat2 for mappi…
-
Hi Jon,
Sorry to bother you with this, but I'm stuck on the last step of a 'funannotate predict' where tbl2asn is hitting a fatal error. I've tried about different versions of tbl2asn in the docke…
-
Hello dear friends,
Thanks for your proving this software. I'm wondering how to cite **RepeatMasker** and **RepeatModeler**? These software called other softwares, like Recon, TRF, RMBlast, RepeatS…