-
**Datasets > Other data**
- Create a new subfolder for mappable genome
**Create new section to explain the mappable genome**
- The mappable genome was created by Claudia Arnedo in the Hotspots pr…
-
Hey,
We only get a vcf file for tag genomes and SNP files for each genome in gt_results. Do you have any suggestions for making a SNP matrix of all genome?
Thanks!
-
**Describe the issue**
When running RepeatModeler, I am consistently getting the same issue at the clustering step of the LTR Pipeline. I am getting essentially the same error message as in #241, h…
-
add synteny to hg38 and reference gene track if possible too
-
Reposted from the original question of @MG-DYM
Hi Sir,I want to use T2T-genome and its transcripts.gtf to builde the Reference.It's going wrong at :
Jul 04 21:37:17 ..... started STAR run
Jul …
-
Perhaps I am missing it, but is there a way to get SuperPang to output the positions in each input genome covered by each SuperPang assembly sequence? While NBP2origins.tsv at least gives the genome(s…
-
_First spotted by @over-there-is (Edited)_
tree: https://nextstrain.org/fetch/genome.ucsc.edu/trash/ct/sub…
-
### Description of the bug
When I use my custom reference, error always show: This path is not available within annotation-cache. Please check https://annotation-cache.github.io/ to create a request …
-
### Aims/objectives.
What if we use *e.g.* Ensembl 110 (for sequence context, annotation in general such as features, gene assigment, and complementing RBP annotation) and link reported sites to Ense…
-
Getting `Error: Download error: stream error: stream ID 5; INTERNAL_ERROR; received from peer` from multiple hosts, can't get it to work from anywhere.
```
$ datasets download virus genome taxon 1…