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We had been tentatively scheduling a Feb workshop and had agreed to help Dev organize a workshop from the plant pathology group. Those items now overlap. We need to decide how to proceed.
I got thi…
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@adamhsparks @grunwald @zachary-foster
I went through my sample of 50 articles again and came up with this categorization specific to papers in plant disease-related journals. You may want to prop…
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### Feature description
When a user runs a Galaxy workflow then returns to the site later, it is difficult to find the galaxy results. Needed fixes:
- The primary account page needs the same edits, …
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### Feature description
When you click on a JBrowse feature, it gives you a bunch of JBrowse-generated sequences. To click back into the website, you have to know to right click, which users do not…
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Hello Alex,
Is it possible to check which fasta sequence ids were used to generate a given STAR index? I also was wondering if there is a chance to update a current index with more sequences.
Th…
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Based on a recent email, users aren't finding the partners page, which is buried under "About." I think it would be better to put somewhere more easily discoverable. Ideas:
* "Learn more about the …
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### Bug description
Only 10 organism show up, no paging available. Tested on firefox and chrome. (We have few enough organisms that paging should not really be necessary)
### Location
https://w…
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Hello,
I am using STAR to align several different libraries (at least 6). All the libraries are being mapped to the same genome hence the STAR index is same. Based on a cursory analysis I found tha…
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Hi Sergei,
I've run RELAX on the Datamonkey server about 20 times on a specific gene and I keep getting negative LR values. I understand this is because the alternative model didn't converge on the…
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When running `funannotate compare` I get the following error message:
>[Mar 26 03:39 PM]: Running funannotate v1.3.0-beta
[Mar 26 03:39 PM]: Missing Dependencies: find_enrichment.py, mafft, raxmlHPC…