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A few minor questions first -
* so, the sum of the `n_` lines should equal one? and `kmer_p` always ends at x=1, y=1.
* if correct, would suggest adding 'proportion of nodes' as y axis label.
* m…
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Output DNA sequence does not always translate to the correct input protein to be optimized.
Reproducible steps:
Click Protein
Select E. coli, and select Yeast
Paste sequence:
MGSSHHHHHHSS…
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I samarbete m pilsnerkokaren. Överens om ett recept.
Idag 14 okt.
1,7 liter förkultur. 170g dme
Ett paket wlp850, Copenhagen lager yeast
Mfg 21 aug 2019
Bbf 17 feb 2020
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Add Crude Glycerol as a product produced by mixing Yeast, something sugary item (e.g. Sugar/Honeyed Apple) and a water-sulfite solution (I think that's how it works). The Crude Glycerol can then be pu…
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Greetings,
I'm getting an error trying to run `bamCoverage` on a bam file (converted from bed via `bedToBam` and then sorted/indexed by `samtools`). Tech details below. Any guidance is much appreci…
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```--------
checking for required files:
--------
while parsing a block mapping
in "examples/yeast.yaml", line 36, column 3
expected , but found ''
in "examples/yeast.yaml", line 37, colum…
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I have just successfully run Sniffles2 with ~45 yeast genomes. What is the recommended way to visualize multi-sample VCF files generated from Sniffles?
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_From @Cerzi on February 15, 2018 4:50_
One person with maxed out relevant skills is able to set large work projects (eg >999) on workstations all across the world, which can then be used by other un…
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Thanks for putting together these test suites, very nice work!
I have some usability questions (possibly issues):
A) Minor: it's unclear what model formats are accepted, since it's just a string o…
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Hi Daniel,
After I run the gap-filling command using my defined medium, I meet errors, as below:
![image](https://github.com/cdanielmachado/carveme/assets/133230591/47f6bb23-3bcf-43ca-8711-557…