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I installed Tfold and ran it. But I got the following issue. Can you let me know how to solve it? Thank you.
$ ./run_alphafold.sh
2024-07-16 10:13:16.461777: I tensorflow/stream_executor/platform/…
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2024-01-22 21:33:14,662 Unable to initialize backend 'rocm': NOT_FOUND: Could not find registered platform with name: "rocm". Available platform names are: CUDA
2024-01-22 21:33:14,665 Unable to init…
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* link to support ticket: [#2022100760000476](https://otrsdict.ugent.be/otrs/index.pl?Action=AgentTicketZoom;TicketID=95856) + [#2023032260001029](https://otrsdict.ugent.be/otrs/index.pl?Action=AgentT…
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recently merged: #130
The module information in that update is correct however it also references data that does not exist in the public location specified.
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I have a question regarding the installation of AlphaLink2. Since our HPC cluster already has AlphaFold installed, should I simply skip the AlphaFold installation steps in your procedure for setting u…
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Does PyMOL read .glb files? I am trying to import some structures from the AlphaFold Protein Structure Database and my PyMOL keeps crashing. I'm not sure whether the problem is on my end. It seems t…
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Thank you for this great work. I learned a lot of insights of alphafold from openfold paper.
I am predicting antibody-antigen complex. In my case, I already know the structure of Ab-Ag complex, …
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I would like to know what is the difference between Alphafold/UniProt50 and Alphafold/UniProt50-minimal?
I would like understand the difference and how it affects in terms of usage and size required …
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I am trying to figure out how Evodock works.
Could be that I am mistaken and didnt get the real pourpose of the tool. I am trying to use:
> Local assembly - Predicting assembly structure from mu…
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Hi,
Beautiful work! Could you please share the Alphafold prediction details for these huge protein assembles? (like single-sequence mode or MSA mode and recycles setting)
Thanks in advance!