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Hi,
There are too many warnings like the following when I run `DRAM-v.py distill -i annotation/annotations.tsv -o annotation/distilled.`
```
/DRAM/lib/python3.9/site-packages/mag_annotator/summariz…
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* eggnog2gbk version: emapper2gbk 0.3.0
* Python version: 3.10.1
* Operating System: Ubuntu 20.04
* eggnogmapper: 2.1.9
### Description
I used the `genes` mode to get the gbk from my genomes,…
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I found an issue with the EC numbers on the protein pages and I have some suggestions for changes to how the EC numbers are displayed on the front end that we could discuss during the general meeting:…
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Hello,
I installed saccharis_2 on an HPC cluster using conda.
The version I am running is 2.0.0.dev22.
I am trying to test saccharis using the following command:
```
saccharis \
--family GH…
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Hello there!
Thank you for developing DRAm, it is a great tool and I've enjoyed playing around with its functionalities, in particular, with DRAM distil. I managed to generate nice visuals using …
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Hi, I want to ask about the evalue and score when we use eggnog mapper. What is the the score and e value signify.
I am annotating the WGS using EGGNOC mapper with each gene i get this score can yo…
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Version: 1.2.1
System details: Ubuntu 22
COG product names appear incomplete in the annotation summary file, for instance:
locus_tag | FOAM | KEGG | COG | CAZy | …
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Hi,
I was running `DRAM-v.py annotate` and it looked like it finished in 6 hours. I do have the annotations.tsv file. This is the Slurm output:
> 2022-10-20 20:20:57.811197: Viral annotation sta…
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Hello, I have performed co-assembly of a whole metagenome consisting 8 samples.
I have gathered the orfs associated with my external database like following:
# get the information of GH families an…
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Hello!
Thanks for this amazing program, I love how straightforward it is! I had a couple of questions for you, if that's ok. We downloaded the databases for DRAM in 2021 (see attached
[db.txt](htt…