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E.g. have the feature ids be `pybedtools.Interval` objects or something. Or some other kind of multiindex?
I'm thinking of this for methylation data and binding data.
@gpratt @mlovci any input?
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Update OwnerPrincipal for the Microbial Collection to
Owner Principal: | cn=All NIST,ou=groups,o=NIST,cn=Microbial Metrology,ou=groups,o=NIST
Remove cn=Genome Editing Consortium entry
![Image](htt…
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**Why is there such a high C2A/C2TEiditingIndex value in my result? what went wrong?**
**my code**
```
RNAEditingIndex -d /data/output/level_3_editing/bam/${sample} \
-f hg38_2passMode_dedu…
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Dear liumz,
Thank you very much for your scripts, when i use define_statistics_add_filter.py, it shows:
#Plot dot plot
cmd = "/home/mengzhu/Scripts/R/TranslocPlot.R results/{}_Editi…
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@snezhkaoliferenko mentioned in her talk that some of the biotech papers were a useful source of metabolic data. I tend to ignore these, but here is one such example:
We could use this as publish…
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This issue is for keeping track of options for sequencing my DNA. Unfortunately, it seems all known methods require me to grant rights to my genes to the sequencing organization (including some copyr…
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Currently there is no clear way how to specify that a sub-part (ComponentDefinition) is inserted at a specific location within another ComponentDefinition.
This would be important for the descript…
graik updated
2 years ago
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I am attempting to use quickmerge in an attempt to merge contigs from a long-read assembly into chromosome-length scaffolds using the hg38 reference genome. Please see the example command below:
me…
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Rather than having a species argument referring to genome data in code, why not let this argument take a two column file (chromosone name, chromosome length) and parse it to let users process data of …