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When I go through the first step (the command as guppy_basecaller -i fast5_pass/ -c ~/biosoft/ont-guppy-cpu/data/dna_r10.4.1_e8.2_400bps_sup.cfg --num_callers 10 --cpu_threads_per_caller 5 --save_path…
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Adding support for different protocols is all well and good, but I want to know that there's actual content to browse using it. Even with something like text:// you at least have two known sites that …
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after using user script helper root install and using that to install guppy screen and trying both gui . the guppy guib says "waiting for printer to initialize." i can still select a few buttons but…
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Hi, I have this following error while executing preprocess:
[9c/129f0f] process > baseCalling (guppy-RedOak_WGA-0) [100%] 1 of 1, failed: 1 ✘
[- ] process > concatenateFastQFiles -…
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The same question here. Given the situation that Guppy has been deprecated, will NanoCaller support dorado basecaller with R10.4.1 flowcells?
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Hi Experts,
Meet an exception in creating hpy instance like below:
2024-04-01T07:21:41Z Wa(180)[+] sha: h=guppy.hpy()
2024-04-01T07:21:41Z Wa(180)[+] sha: File "/usr/lib/x/y/lib/python/gupp…
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HI NanoSim developers,
I am wondering if you have a pre-trained model for simulating genomic reads from the human genomes close to ones basecalled from newer versions of Guppy (e.g. Guppy 6) under …
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A la Secret Kittens.
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> regarding panicking, how about adding a generic `unwrap`: `forall R, E. [R, E] -> R` function to the guppy prelude? Maybe guppy needs better Sum support first?
_Originally posted by @ss2165 in ht…
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What happens if I write
```python
@guppy
def f() -> int:
py = lambda x: x+1
return py(2)
```
?
_Originally posted by @aborgna-q in https://github.com/CQCL/guppylang/pull/515#discussi…