-
Is it possible to inlcude imzml ontology (https://ms-imaging.org/imzml/ or https://github.com/imzML/imzML) as a part of ProteoWizard? It is almost the same as mzml fromat with some MS imaging related …
-
Hi, i've encountered a behavior i do not fully understand and i had a few questions regarding the XAxisDepth() method and other fuctions (in particular .GetXAxis() and .GetMeanSpectrum() ) when i am w…
-
Hi there!
In our research group we are actively working with MS-imaging (MSI) data and I was wondering about how to properly name and add the spatial coordinates information to a `MsBackend` object …
-
So this is quite unfortunate. Roughly every time it runs, it creates some duplicates.
```
$ bash no-dupes.sh
# Checking eu
Error! Duplicates!
4 "/Metabolomics/Msi analyte distribution/DO…
-
### Basic information
* My operating system and version: Windows 11 64 bits
* My MZmine version: MZmine 3.4.0
* JAVA 8 up grade 361 (1.8.0_361-b09)
### What happened
 to imzML using your jimzMLConverter-2.0.6 . However, I got only one file ( .imzML.ibdtmp file ) instead of .imzMLand .ibd files when I use the comma…
-
if the scan polarity ends up being "n/a", the file cannot be written?
```mzml2isa -i /net/isilonP/public/rw/homes/tc_cm01/metabolights/prod/studies/stage/private/MTBLS176/ -o . -s MTBLS176
inpu…
khaug updated
7 years ago
-
I have been evaluating multiple imzML parsers (see here https://imzml.github.io/) with publicly available imzML datasets (e.g. https://metaspace2020.eu/datasets?ds=2017-06-30_07h26m26s) and experience…