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**Supervisor:** Bérénice Batut
**For degree:** Bachelor
**Status:** Open
**Keywords:** Metagenomics, microbiome, data analysis, training
# Global context
Emerging and powerful technologies li…
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Hi there,
I have two questions:
1. You have mentioned that "ONTbarcoder has been optimized for protein coding gene like COI. While **there are ways** to obtain consensus for length variable non …
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Hello,
I acknowledge that I have submitted several posts to this GitHub Discussions in the past few weeks, and I always appreciate your prompt and helpful replies! This package and your replies have …
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### Title
16s Metagenomic analysis of Gut Microbiome
### Leaders
Dipankar Bachar
### Collaborators
_No response_
### Brainhack Global 2022 Event
Brainhack Marseille
### Projec…
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Hello Prof. Yu,
I find your clusterProfiler (http://yulab-smu.top/clusterProfiler-book/) a useful tool and tried to follow the tutorial.
Since I am working on the gut microbiome and have KEGG pathwa…
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We plan to expand our catalogs of tutorials for whole-genome microbiome data analysis.
Here are some ideas we will implement:
- Expand the introduction slide deck to add more overview of the diffe…
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Dear all,
I have generated tables from two analysis modes (sqm_longreads and co-assembly). I have some queries regarding the KO.abund.tsv file:
Are the tables normalized?
If they are not normal…
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Hi
Is it possible use models other than AGORA models to fulfill metagenomic taxonomies models in MicrobiomeModelingToolbox? If possible, what conditions required for extra models?
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A comprehensive analysis of gut and skin microbiota in canine atopic dermatitis in Shiba Inu dogs – Mirja Thomsen – Microbiome
https://microbiomejournal.biomedcentral.com/articles/10.1186/s40168-023-…
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Kindly comment on this issue why you are interested in this mini-project