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Many papers on mass-spectrometry based proteomics have shown the use of deep learning for intensity prediction, combining scores across search algorithms, retention time, collision corss section predi…
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Hi!
When using foldcomp compress on this file: https://raw.githubusercontent.com/nf-core/test-datasets/modules/data/proteomics/pdb/1tim.pdb
it breaks into 4 parts: 1tim.pdbA_0.fcz, 1tim.pdbA_1.fcz…
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Hi Guangchuang,
Maybe something to add/link to in your book: https://support.bioconductor.org/p/p134523/#p134554 ?
It links to some example code on how to use `clusterProfiler` for analysis of prote…
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The MC2 Center data model does not currently enable assay-specific metadata to be recorded. Adding these models is a critical part of supporting data sharing and reuse. Potential models to add were or…
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The dataset types in the gEAR portal are nice and tidy:
```
mysql> select dtype, count(dtype) from dataset group by dtype;
+-----------------------+--------------+
| dtype | coun…
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**Addition of Algorithm:**
My name is Matthew Marino. I am a CFDE GlyGEN summer intern working under Jeet Vora and Rene Ranzinger. I am currently trying to create multiomics workflows starting with…
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On Wed, Aug 30, 2017 at 11:10 PM, Nuno Bandeira wrote:
Hi Raja,
It was great to touch base today - I'm attaching the [Nature Biotech paper](https://www.ncbi.nlm.nih.gov/pubmed/27504778) I menti…
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# Design (@brianraymor)
## obs
...
### modality
Key
modality
Annotator
Curator MUST annotate.
Value
categorical wit…
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@ypriverol Do you have a set of SDRF files for experiments of all different kinds of expected flavors?
If not we should systematically generate SDRF example files with all the different labelling t…