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Hi,
I can get sequencing saturation curve using cellranger from 10x genomics single cell data. How to get it using simpleaf ?
This is the definition of sequencing saturation (https://kb.10xgenomics…
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Hello,
Thank you for developing these suite of tools - I'm very interested in leveraging the piscem map-bulk and piscem-infer workflow to process some joint host-metagenomic sequencing data, and am h…
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`keyword_keepgit` `owner:jxs599@nci.org.au` `type_defect` | by mrd599
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The UM with JULES has restart reproducibility, i.e. a single 2 month run is identical to 2 successive one month runs. …
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Discussion online about how best to accept pooled data. Here is an issue to track comments on pooled data.
The solution for accepting pooled data can be either UI changes, changes to existing drop…
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_this is a course draft, no dates are fixed yet but this will change soon, comments are welcome_
## Do-Not-Repeat-Yourself
In this 3 parts hacky hours we will learn how to get from raw data to inform…
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@pimterry as I experienced lambda-git load times of up to 7 secs @ 128MB, I have been looking for alternate ways to have lambda-git work so we can reduce its load time.
Wanted to check if you have…
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This issue will collect all feedback submitted via the feedback form at the end of each tutorial
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Results have been [aggregated](https://nbviewer.jupyter.org/github/bebatut/galaxy-training-m…
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Hi everyone,
I'm running the simpleaf wrapper and at some point into the analysis, piscem crashes, giving me the following error code (full input & output below):
`command unsuccessful (signal: 6…
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I am getting average Q5 reads from my 4kHz dorado-0.3.4-rc2. I had similar problem with 0.3.2
The command line
```
./dorado duplex -t 96 -v dna_r10.4.1_e8.2_400bps_sup@v4.1.0 ./pod5/split_by_ch…
ymcki updated
4 months ago
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I would like to make these two categories appear in two columns rather than one. Does anyone know of a way to do this?
https://i.imgur.com/qMHleB0.png
This is the code...
```
# Skills
``…