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From https://github.com/sars-cov-2-variants/lineage-proposals/issues/1503
JN.1+T20285C,A20284T(Orf1b:I2273S)+G22599C,T22928C(S:R346T,F456L)
GISAID query:T20285C, A20284T, C18894T, G22599C,T22928…
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From branch 64 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1+C22858T+S:F456L
Query: C22858T,T22928C,C18894T,-7113
No. of seqs: 23 (South Korea 21 Japan 1 USA 1)
Fir…
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From branch 74 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1.34+Orf1a:T2846R, S100R, E386D+S:F456L
Query: C23673T,T22928C, C8802T,T565A
No. of seqs: 23 (Denmark 1 Fra…
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From branch 49 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1 > S:H1101Y ( C24863T )>S:F456L (T22928C)
Query:C24863T, T22928C, T3565C
No. of seqs: 25 (Canada 1 China …
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From branch 30 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1.26+S:F456L
Query: C26894T, C7732T,G22599C, T22928C
No. of seqs: 32 (Canada 26 USA 6)
First: EPI_ISL_1894…
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From branch 99 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1+T17859C+C3172T+S:R346T,F456L
Query: T17859C,T22928C,T3172G,T3565C
No. of seqs: 22 on UShER (Portugal 4 S…
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Portugal is experiencing a steep wave of infections , interestingly the lineage proposed below is coming from there and carries a recently convergent mutation S:V62F (see recently designated Jn.1.62 a…
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From branch 48 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1+C10078T,T14526C,C21911T+S:F456L
Query: T22928C,C10078T,T14526C
No.of seqs: 35 seqs (Australia 23 Germany…
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Defining mutations:
KP.2.2 > T24364C > ORF1a:K2660R (A21446G), S:T22N (C21627A)
NEW QUERY: A21446G,C21627A (_old query :T24364C ,A21446G,C21627A_)
Samples: 10
Country: US, France
Tree:
https…
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From branch 86 of https://github.com/sars-cov-2-variants/lineage-proposals/issues/1253
JN.1+C17119T+A2251G+S:F456L(T22930A)
Query: T22930A, C17119T, A2251G
No. of seqs: 21 (South Korea 20 USA 1)
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