-
WARNING: A speciation edge is smaller than the specified minimum branch length.
WARNING: A speciation edge is smaller than the specified minimum branch length.
WARNING: A speciation edge is smaller …
-
```
2) The "Speciation: Birth-death serially sampled model", the ideal
parameterization would be (instead of bdss.birthRate, bdss.relativeDeathRate,
bdss.psi):
bdss.birthRate (=lambda keep as it is)…
-
Originally reported on Google Code with ID 563
```
2) The "Speciation: Birth-death serially sampled model", the ideal parameterization
would be (instead of bdss.birthRate, bdss.relativeDeathRate, bds…
-
```
2) The "Speciation: Birth-death serially sampled model", the ideal
parameterization would be (instead of bdss.birthRate, bdss.relativeDeathRate,
bdss.psi):
bdss.birthRate (=lambda keep as it is)…
-
**Describe the bug**
Rows with fraction and speciation that need to be converted FROM some text TO NA are not flagged as HARMONIZED in the TADA.Harmonized.Flag column.
In TADA_HarmonizeSynonyms,…
-
Minimal example:
```R
library(PhyloSim)
specRates
-
```
2) The "Speciation: Birth-death serially sampled model", the ideal
parameterization would be (instead of bdss.birthRate, bdss.relativeDeathRate,
bdss.psi):
bdss.birthRate (=lambda keep as it is)…
-
Speciation via some distance measurement is a fundamental aspect of the `NEAT` algorithm. I suggest clarifying in the docs that the included implementation diverges from the original specification, an…
-
```
2) The "Speciation: Birth-death serially sampled model", the ideal
parameterization would be (instead of bdss.birthRate, bdss.relativeDeathRate,
bdss.psi):
bdss.birthRate (=lambda keep as it is)…
-
Current speciation models in Kaphi assume constant rates of speciation (birth) and extinction (death). It would be great if we can implement rate variation over time. This is implemented in TreePar …