TheoreticalEcology EcoPhyloSim issues

TheoreticalEcology / EcoPhyloSim

R package for simulation of biogeographical and phylogenetic data

http://theoreticalecology.github.io/EcoPhyloSim/

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dependencies 'kulife', 'apTreeshape', 'PhyloMeasures' are not available any more on CRAN

#89 florianhartig opened 8 months ago
1
Establish GH actions

#88 florianhartig closed 8 months ago
0
Changed main package documentation from .Rd file to .R file

#87 D-Maar closed 8 months ago
4
Change PhyloSim-package.RD to R file with Roxygen

#86 florianhartig closed 8 months ago
1
Cleanup and rework

#85 florianhartig closed 2 months ago
0
error runSimulation - argument "fission" is missing, with no default

#84 florianhartig closed 8 months ago
5
Vignette

#83 florianhartig closed 6 years ago
2
Problem in phylogeny after bugfix

#82 TankredO opened 7 years ago
3
Dying individual could become its own parent

#81 TankredO opened 7 years ago
0
Mortality implementation

#80 florianhartig opened 7 years ago
1
Species m_Mean updated but not m_Variance

#79 TankredO closed 7 years ago
9
Environment does not seems to influence simulation

#78 TankredO closed 7 years ago
2
Complete Vignette

#77 TankredO opened 7 years ago
0
Write test for prune

#76 florianhartig opened 7 years ago
1
High speciation rates cause runSimulation to crash sometimes

#75 TankredO opened 7 years ago
8
Avoid export of Rcpp functions

#74 florianhartig opened 7 years ago
0
Memory leak in runSimulation

#73 TankredO opened 7 years ago
3
Check and potentially complement unit tests

#72 florianhartig opened 7 years ago
0
runSimulationBatch() often throws error using windows 8 and 10

#71 TankredO closed 7 years ago
3
n = 1 in local plots produces n = 2 plots

#70 TankredO closed 7 years ago
1
testthat used in examples?

#69 TankredO closed 7 years ago
1
LocalPlots

#68 florianhartig opened 8 years ago
10
Harmonize environment

#67 florianhartig opened 8 years ago
0
Vignette is not up to date

#66 stefan-paul closed 8 years ago
4
Check localPlots function

#65 florianhartig closed 8 years ago
2
Change Name

#64 florianhartig opened 8 years ago
3
Merge branch with other speciation mechanism back into trunk

#63 florianhartig closed 8 years ago
1
Error in write phylogeny

#62 florianhartig opened 8 years ago
3
Create distance / resistance matrix

#61 florianhartig opened 8 years ago
0
Set up C code for Eclipse

#60 florianhartig closed 8 years ago
4
Change size argument in localPlots

#59 florianhartig closed 8 years ago
1
Provide environment from R

#58 florianhartig closed 8 years ago
1
Option to have nested and non-nested SAC

#57 florianhartig closed 8 years ago
3
runsimulationBatch mit mehr als 2 cores gibt error

#56 christianbuschbeck closed 8 years ago
3
Simulationen

#55 florianhartig opened 8 years ago
5
callModel not found

#54 florianhartig closed 7 years ago
7
Exclude help pages from internal / obsolete functions

#53 florianhartig opened 8 years ago
1
Rcpp issues / installation from GitHub not always working

#52 stefan-paul closed 8 years ago
2
Reduce dependencies

#51 florianhartig opened 8 years ago
0
source files for vignette figures?

#50 florianhartig closed 8 years ago
1
Vignette optimieren

#49 florianhartig closed 8 years ago
10
vignette page 2

#48 florianhartig closed 8 years ago
0
make phylosim batch creator

#47 florianhartig closed 8 years ago
2
authors@R creates error in check

#46 florianhartig closed 8 years ago
1
Improve vignette

#45 florianhartig closed 8 years ago
1
Vignette is not compiled during package installation

#44 florianhartig closed 8 years ago
5
Organize package authors / contributors

#43 florianhartig closed 8 years ago
1
Vignette

#42 florianhartig closed 8 years ago
3
Package Name

#41 florianhartig closed 8 years ago
5
Add tests for the package functions

#40 florianhartig closed 8 years ago
4