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Need to draft what the UI for an end user who wants to upload metadata to BETYdb will look like.
This will be needed for Phase II of GSOC but it will help to have this sooner. See also https://osf.…
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In addition to functions required for metadata upload, package should also include betydb functions from ropensci traits.
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**Task to do**
Allow Transformers to determine if metadata files are required
**Reason**
There are 'helper' Transformers that don't need metadata. For example, loading CSV files into BETYdb
**…
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Need to clarify in datasets and metadata:
- dates
- timezones
- hand measurements vs gantry measurements
- gdd values, calculations, and dates used
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Vocabularies to support and framework for relating synonyms across vocabularies, enable to search datasets with translation across vocabularies
Vocabularies to support:
- CGIAR sorghum ontology:
- …
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Per https://github.com/terraref/reference-data/issues/185#issuecomment-331208513, we need to translate the PLY coordinates to lat/long coordinates in ply2las extractor. Currently, the files use the po…
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Due to some cultivars being present in the hapmap file but having no available trait data, create look up table of all cultivars with associated trait data.
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Discuss different methods of canopy height measurements with @rossarun and @ishitadebnath and provide new dataset with measurements labeled as hand-measured or gantry-measured.
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Steps:
- [x] Start Clowder via Docker
- [x] Get BETY key from @max-zilla
- [x] Start an extractor
- [x] Upload a raw file & metadata
- [ ] Confirm that the extractor worked and the data was pr…