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Howdy,
I tried to test covviz and ran into errors when building the final report - It reported that there were no traces on any of the chromosomes (see below) but I did check NF-indexcov.bed.gz an…
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I was wondering if using the bits @ewels posted on slack, we could solve both of these issues and introduce a "test autodiscovery" from a single github action, that spawns "pytest workflow" for each c…
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Hi,
I am trying to run the pipeline with the following command using Singularity:
`nextflow run microgenlab/porefile --fq /home/lvdrloos/Test_PoreFile/*.fastq -- isDemultiplexed No --minimap2 -pro…
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## New feature
Hi! Thanks for using Nextflow and submitting the proposal
for a new feature or the enhancement of an existing functionality.
Please replace this text providing a short descript…
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Hi,
I tried NanoMod. But after index reference, it stops. Would you give me advice what to solve this?
command is "nextflow run nanomod.nf -with-docker", and it stops even I added -resume.
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Hi! I'm trying to pull the singularity image but I get this error:
```
singularity pull --name nfcore-proteomicslfq-1.0.0.img docker://nfcore/proteomicslfq:1.0.0
WARNING: pull for Docker Hub …
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## New feature
GitHub just announced the GitHub Container Registry (GHCR) to store container images:
https://github.blog/2020-09-01-introducing-github-container-registry/
## Usage scenario
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This is data preparation step for training a flood inundation model using USFIMR as label data
- [x] Use `s3://usfimr-data/catalog.json` as a way to get flood event locations and times
* Using i…
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@sharma-shruti we need to design the PR and Issue templates - here's a starting point
https://tommcfarlin.com/github-pr-templates/
And here are some sample templates
https://github.com/samcc…
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**Description**
When running the workflow on Phoenix using the phoenix profile, it starts fine and automatically downloads the prebuild singularity image to `work/singularity/nf-core-eager.img`. Howe…