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https://gdc.cancer.gov/about-data/gdc-data-processing
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### Description of feature
An option to enter the pipeline at the post-merge step with a finalized Seurat object `.rds`. This would allow for subset analysis for a specific cell type for example.
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### Description of the bug
When running the pipeline with `--run_ancestry` an error occurs during process `'PGSCATALOG_PGSCCALC:PGSCCALC:APPLY_SCORE:SCORE_AGGREGATE (reference)` , I will have the …
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### Operating System
Ubuntu 22.04
### Other Linux
_No response_
### Workflow Version
v1.4.0
### Workflow Execution
Command line (Cluster)
### Other workflow execution
_No re…
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### Checklist
- [x] I've read the [contribution guidelines](https://github.com/autowarefoundation/autoware/blob/main/CONTRIBUTING.md).
- [x] I've searched other issues and no duplicate issues were fo…
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### Instrument or Category
NIRCam Stage 1/2 Pipeline, MIRI Stage 1/2 Pipeline, Image Tools, Analysis Tools
### What is your suggestion?
As discussed in slack by @kdlawson @JarronL @juliengirard @ka…
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I am getting the following error while running the test script for CADD 1.7:
```
$ ./CADD.sh -a -g GRCh38 -o ~/tmp/cadd/output_inclAnno_GRCh37.tsv.gz ./test/input.vcf
CADD-v1.7 (c) University of …
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There are multiple workflows concerning Voronoi segmentation, which are from the work on "Building FAIR image analysis pipelines for high-content-screening (HCS) data using Galaxy" by Riccardo Massei:…
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Does PEGR support cases where the data has been generated on a third-party sequencer (e.g., a core facility) and the PEGR users/admins don't have access to the complete sequencer output? For example, …
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Maybe just use the google charts API to output a URL that contains a histogram? Or maybe there's a simple package that can just create one.