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**Preferred term label:**
Nodular-centrilobular without tree-in-bud pattern
**Synonyms**
**Definition (free text, please give PubMed ID)**
A nodular pattern on pulmonary high-resolution comp…
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** Please provide a justification of adding/removing the mutation along along with the following essential information.
We are screening a particular strain responsible for an outbreak - Beijing wi…
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Session info
```r
─────────
setting value
version R version 3.6.3 (2020-02-29)
os Ubuntu 18.04.5 LTS
system x86_64, linux-gnu
ui …
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Hi,
I am getting low % of properly paired reads in _snap paired_ comparatively to _bwa mem_ (24.19% vs 99.34%). These are values for trimmed input. Without trimming, I get 0% properly paired reads …
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Dear ISS developers and community,
**The issue**
Thanks for the software!
I run into the following error: `KeyError: '>'` (I provided the complete stderr below).
Any help is greatly appreciated.…
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Can I add some new seqs into an already-built database, without do it from scratch?
I see https://github.com/DerrickWood/kraken2/issues/45 says no to this question. But I want to know if I can inspe…
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See https://github.com/DerrickWood/kraken/issues/127 for original submission. Example output line (with initial "C" but taxid 0) is below:
`C M00963:162:000000000-AHPVV:1:1101:14752:1397 0 123|123 …
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First of all, let me thank you for making this deck. I had something similar in mind, but alas, I was too busy.
I've found a couple of things that I think could be improved but don't want to open a…
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I have run the following command and got an issue. How can I solve it?
$ '/home/genomic-lab/anaconda3/envs/pyppi/bin/run_gubbins.py' -p gubbins clean.full.aln
--- Gubbins 2.4.1 ---
Crouch…
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Moving [this](https://github.com/marbl/canu/issues/1586#issuecomment-587388733) into its own issue.
I am attempting to assemble a *Mycobacterium tuberculosis* sample (which I actually have Illumina, …