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Please provide as much information as you can:
* **Suggested term label:**
histone H3-K27 methyltransferase activator activity
* **Definition (free text)**
def: "Binds to and increases the …
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The current annotation service only accepts a Gene symbol and annotates with (or searches for) its GO terms, pathways and biogrid interactions. These needs to be expanded to be able to annotate protei…
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This is a list of (exported) symbols that are reviewed in the light of the new class implementation (see #38). Issue opened for progress tracking and general API discussion.
![20161213_114538](http…
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GPAD specifies the relationships between the subject of annotation (GP, complex) and a primary GO term. T
Relations are:
- [part_of](http://purl.obolibrary.org/obo/BFO_0000050): CC
- [enables](http:/…
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Hi,
I am trying to run QC step and it shows error.
Cell In[45], line 14
11 from pycisTopic.qc import *
12 path_to_regions = {'D59':os.path.join(work_dir, 'scATAC[/consensus_peak_calling/consensu…
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Hi,
I just updated my databases and need to update my annotations following these instructions:
Alternatively, if you already have a predicted proteins fasta file and/or an alignment table for examp…
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I have a corpus of ~75,000 abstracts that I want to make a KG out of using OntoGPT. After 4 hours, it only got through 50 documents -- not super promising!
I took a look through the docs to see if …
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Reactome
http://amigo.geneontology.org/amigo/gene_product/UniProtKB:P62979
http://amigo.geneontology.org/amigo/gene_product/UniProtKB:P62987
About 90 annotations for both spanning many processe…
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Yet another example where multiple concepts are needed for 1 output is Meta-pipe, generating annotation of (meta)genome assembly (contigs) with found protein-coding genes, protein domains, and informa…
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Related to #46 I was thinking:
+ Should we move some of the functionality to map ranges within proteins to the genome to `ensembldb`? Somehow that would make sense, since all the data is there and al…