MOZI-AI annotation-scheme issues

MOZI-AI / annotation-scheme

Human Gene annotation service backend

GNU General Public License v3.0

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issues

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Update the parser to create nodes without name

#232 Habush opened 3 years ago
0
Fix gene-level not found issue

#231 Habush closed 3 years ago
0
Update master branch to include new-atomtypes work

#230 Habush closed 3 years ago
0
Fix various bugs

#229 Habush closed 3 years ago
0
Expand annotation service to include GO and Protein annotation

#228 Habush closed 3 years ago
0
Return a GeneNode instead of ConceptNode for uniprot/coding-rna names

#227 Habush closed 3 years ago
0
types should be passed as strings to grpc server

#226 Habush closed 3 years ago
0
Protein annotation

#225 Habush closed 3 years ago
0
Fix the location output pattern

#224 tanksha closed 3 years ago
0
Use GO ID as location

#223 tanksha closed 3 years ago
0
Add main concept node to identify main nodes

#222 Habush closed 3 years ago
0
Use type names in query rather type ids

#221 Habush closed 3 years ago
0
Fix pathway issues

#220 Habush closed 3 years ago
0
Add missing gene-info functions

#219 Habush closed 3 years ago
0
Unused function during refactor

#218 tanksha closed 3 years ago
0
Changes location string to GO ID

#217 tanksha closed 3 years ago
0
Add Support for New Atom Types

#216 Habush closed 3 years ago
1
Add pathways attribute for a node

#215 tanksha opened 3 years ago
0
Access remote rpc server to execute pattern matching queries

#214 Habush closed 3 years ago
3
Refactor the code to make it easy for testing

#213 Habush closed 3 years ago
3
Add Go plus annotation

#212 Habush closed 3 years ago
0
Add Go plus relationships

#211 Habush closed 3 years ago
0
Expand the annotation service to support GO annotation

#210 leungmanhin closed 3 years ago
0
Link proteins to drugs that act on them

#209 leungmanhin closed 3 years ago
0
Add STRING DB support & fibers threading

#208 Habush closed 4 years ago
2
Add STRING db Support

#207 Habush closed 4 years ago
0
Fix the issue of incorrect GO annotation selection

#206 Habush closed 4 years ago
0
Improve the module reflection and remove the usage of current-module

#205 Habush closed 4 years ago
0
Add covid filter for biogrid

#204 Habush closed 4 years ago
9
Add annotation option for SARS-CoV-2 genes to be included or not

#203 tanksha opened 4 years ago
1
Removes unnecessary code

#202 tanksha closed 4 years ago
0
Fix the issue of RNA request

#201 Habush closed 4 years ago
0
Use #t /#f instead of "True"/"False"

#200 Habush closed 4 years ago
0
Remove the current mult-threading

#199 Habush closed 4 years ago
2
Doing the same biogrid annotation more than once for a gene returns empty result

#198 Habush closed 4 years ago
0
Use channels for communication between parser and annotation functions

#197 Habush closed 3 years ago
14
Includes Biogrid interaction for COVID19 proteins

#196 tanksha closed 4 years ago
0
Remove unnecessary string conversion when passing results to the parser

#195 Habush closed 4 years ago
1
Add Go Plus relations

#194 Habush closed 4 years ago
1
memoize-function-call doesn't work as expected

#193 Habush closed 4 years ago
3
Expand the service to be able to search nodes other than GeneNode

#192 tanksha opened 4 years ago
3
Improve find-genes

#191 Habush closed 4 years ago
0
Improve the GO annotation with proteins

#190 Habush closed 4 years ago
0
Use SetLink instead of ListLink for biogrid symmetric interactions

#189 tanksha closed 4 years ago
4
Write JSON result to a port

#188 Habush closed 4 years ago
0
The find-genes function requires a fix

#187 tanksha closed 4 years ago
2
Write JSON output to file

#186 Habush closed 4 years ago
0
Add more relationships for GO terms

#185 tanksha closed 4 years ago
1
Add support for STRING database

#184 Habush closed 3 years ago
2
Refactor generate-result function

#183 Habush opened 4 years ago
0