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Fastp creates filtered sequence (fastq.gz) files whose file sizes are large, especially when minimal filtering occurred. **Are these files really necessary to keep?** If not, making them function as t…
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/microbiome/miaSim
Confirm the following by editin…
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Hi,
I noticed that mia has already several options to transform counts. I think it would be a good addition to add to the `transformCounts` function to transform counts to rarefied counts. I could …
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/yiluheihei/microbiomeMarker
Confirm the following…
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Set up test environment for NMDC portal so changes can be tested and not pushed to production without review/QA
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/mcalgaro93/benchdamic
Confirm the following by ed…
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Hello,
I run your workflow on 60cpu -- 500go RAM machine using slurm manager and a singularity install but my job crash at 50% of compleness.
The slurm.err file display the following error mess…
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Hello. I have tried to run the command to assign taxonomy which is,
taxa
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Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/waldronlab/bugsigdbr
Confirm the following by edi…
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## Update 2021-12-06
To join the nf-core community, please visit https://nf-co.re/join
The most important step is to sign up to the nf-core Slack, which is the hub of the community.
Once ther…
ewels updated
2 years ago