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![mutational_signatures.png](https://images.zenhubusercontent.com/5bb45cdce135e46293defe80/7f99896d-f73c-4ae8-a593-3daf570687e8)
Graph at the top has nothing in it.
Examples include variantgrid.com…
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Hello,
I try to run SigProfilerExtractor with this command: `sig.sigProfilerExtractor("matrix", outputfile, inputcatalog, opportunity_genome="GRCh37", exome=True, minimum_signatures=1, maximum_sign…
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When I run the extractor for my DBS.all outputs from MatrixGenerater, the extractor still gave me SBS outputs in the results file. Can you give some insights into what might have caused this issue?
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Hi, this is Zhi. I was trying to add your `convertAlexandrov2Shiraishi` to my Shiny app, [iMutSig](https://zhiyang.shinyapps.io/imutsig/). It works fine with the COSMIC v2 and v3 signatures. By includ…
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**Describe the bug**
ProgressReportNumber in the Milestone Tracker is not showing milestones 3 and above for some studies.
**To Reproduce**
Steps to reproduce the behavior:
1. Go to projectLive-…
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Hi guys,
I've been trying to run purecn through the bcbio workflow, there is very little documentation on how this works or whether I can provide mapping bias or panel of normal data. Some question…
waemm updated
3 years ago
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As the phase one of the mutational signatures work, we want to make mutational signatures data available on the following places:
- (Result View Page) oncoprint tab (a heatmap track per signature)
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inodb updated
3 years ago
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e.g. Ageing, Smoking, Pole, BRCA, Tobacco, MMR, UV, TMZ, Other...
jjgao updated
3 years ago
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Hello Dr. Wang,
Firstly, thank you for making such a powerful tool for mutational signature analysis. I am trying to use sigminer sig_fit to fit COSMIC SBS, DBS, and INDEL signatures to my .vcf dat…
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This is for supporting more data types using categorical generic assay data (e.g. binary mutational signature) as specified in [this RFC](https://github.com/cbioportal/cbioportal/issues/7920).
- Me…