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Hello,
I'm trying to use the run-ngs-pipeline tool on different genes. The genes without SV works just fine, but I get this error when trying to run it on CYP2D6.
I'm on Ubuntu 24.04.1 LTS.
I …
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Dear Developer,
I am using SPADES 3.10 for 50X illumina and 10X pacbio assembly. The genome size is 6G and my RAM is 1T.
My command line is:
spades.py --careful -t 24 -m 980 --dataset dataset.yaml…
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I am running installation with tag v2.5.1 from dev branch. There are many problems which can cause the installation to quit. I am fixing some of them, will I submit a PR ? Also I can see that many too…
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Hello, I am trying to run SPAdes on my seqdata, and I keep running into this error code:
== Error == system call for: "['/appli/conda-env/bioinfo/spades-3.11.0/share/spades-3.11.0-1/bin/ionhammer', …
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Hi guys,
I got an new error when running the command: `java -jar /opt/biosoft/CIRI-full_v2.0/CIRI-vis_v1.4.jar -i out_merge_circRNA_detail.anno -l output_library_length.list -r zma_dna_v4.fa -min 1…
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Hi,
I have an experiment wih a whitelist composed of 35 barcodes (60bp long, non standard technology in development) and when I try to run bustools correct I immediately obtain :
(/bioinfo/local…
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#### Current behavior:
Suspected duplicated metabolites from Recon3D:
reference ID|met ID|affected rxns| Action for mets|Action for rxns|Comments|
|-----------------|-----------------|-------…
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Hi,
This is my first time to use phylowgs and it is possible that I messed up with something. However, the problem is that after following README to git clone the package and compile using the foll…
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hello，
I have a vcf file， which sample name is like “A1”，“C1”；
when I using the filter-tag plugins，it turns out error for group files，maybe you could rewrite the check code
```
/mnt/lustre/u…
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Hi Developers,
I installed Kronatools as root on a system so that different users can use it. I tried running ktImportTaxonomy using a regular user account and I got this error message
_Can't lo…