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I put these slides documenting Ralph Baric at UNC in collaboration with Wuhan Institute of Virology developing chimeras / gain of function to develop Remdesivir and Moderna mRNA-1273 and specifically …
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We (@vgainullin) have found an occurrence of case-sensitive gene names?
http://exac.broadinstitute.org/gene/ENSG00000273045
http://exac.broadinstitute.org/gene/ENSG00000241962
Both of these GEN…
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Hello everyone,
I was trying to run argNorm on data coming from amrfinderplus. Nevertheless, I am encountering an error. I tried also cloning this repo and using the examples files to run the analy…
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Hi,
Could you please clarify documentation of the lncScore. I am new in the lncRNA prediction field and some things were not clear for me. In particular:
`-f input files, --file=input files, ent…
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Hi there,
I'm getting errors running VirSorter.
_I run:_
docker run -v /home/vicky/Downloads/virsorter-data:/data -v /home/vicky/virsorter-run:/wdir --rm discoenv/virsorter:v1.0.3 --db 1 --fna …
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Hi there, and thank you for this tool! I am trying to run some metagenomes through FeGenie and have been successful so far, but I am trying to understand the numbers in FeGenie-heatmap-data.csv a litt…
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Hi,
I am trying to run mmseq-linux v1.0.9 using a large metatranscriptomics dataset as reference (>4 million ORFs). The run stops after saying “Amalgamating transcripts and calculating summary stat…
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Hello, I ran FeGenie successfully (thanks)
I was wondering the meaning of such error message (in bold) at the end on the job. May you tell
I ran the following command./FeGenie.py -bin_dir ./FeGeni…
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Hello there,
I'm trying to use FINDER for the first time, on a Drosophila de novo assembly with locally stored RNA-seq data. Many parts of the pipeline seem to have worked using the installation an…
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Dear OrthoFinder,
Thanks for your such amazing work.
There are multiple protein sequences under each OG, how do I determine the final protein function of each OG. Two ideas, first, annotate all OG m…