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I would be nice if we could have some form of version checking. I built a program with dhtslib-1.13 against htslib-1.10.2 by mistake. Since ABI is still compatible between those htslib versions, progr…
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Hello!
I‘m using bwtool for analysis, encountered this error when i install libbeato.
gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wall -Wformat -Wimplicit -Wreturn-type -Wuninitialized -fno-strict-aliasin…
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Clion builds into some horrible cache directory (example: /Users/droazen/Library/Caches/clion10/cmake/generated/105c72a1/105c72a1/Debug) unless you set CMAKE_RUNTIME_OUTPUT_DIRECTORY in CMakeLists.txt…
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Is there any plan to release a pre complied library like this https://data.broadinstitute.org/alkesgroup/Eagle/downloads/Eagle_v2.4.1.tar.gz for arm64 based platform? If there are no plans to release …
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Hi, I've gotten various compilation issues as I've tried various installs of root, htslib, and samtools available on my HPC. Exactly which versions are required for install?
I've tried samtools 1.9…
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So turns out htslib can be built for [windows](https://github.com/samtools/htslib/issues/907).
I attempted to build dhtslib on windows and got errors for the following:
```
..\..\AppData\Local\dub\…
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I found that ID column from multi-allelic site from a source file only transferred to the first allele in the target file.
My source annotation file:
```
chr21 5030278 rs1258851236 C G,T . . RS=1…
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Hello, I found I can't install the newest pysam. I face the error like this:
[error.txt](https://github.com/pysam-developers/pysam/files/12603259/error.txt)
However, I do install the liblzma and hts…
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We are utilizing EMC on-premise s3-compatible storage.
Htslib does not accommodate non (.s3.amazonaws.com) endpoint urls.
We can successfully modify, re-compile and use htslib/samtools if we swa…
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Add update_aux function to BAM records as htslib now has the following functions:
```
bam_aux_update_str
bam_aux_update_int
bam_aux_update_float
```
ghuls updated
3 years ago