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Hello Berthelier
Forgive me for dozens of questions, It's just that I want to make use of this tool as much as I can.
Since you were interested in potentially autonomous TEs in your study, and you…
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**What is this request referring to?**
#487
Parent | labels | Synonyms | about
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SO:0000186 | LTR/Copia | RLC, Ty1, Copia, LTR-Copia | LTR retrotransposon in the Copia superfami…
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Hi authors,
Thanks for devoloping this very useful tool. I am now tring to use it to liftoff repeats features from one version genome assembly to another of same species but meeting an question. It s…
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Dear Alex
I'm curious to know what the **Log.out file generates a lot of 'Warnigns'**, and also if this can cause alignment issues. I receive 448 notices. Digging a bit, I can see that the warnings…
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As we are preparing for `v7`, it is time to set a codename. As you know, the last three major anvi'o releases had codenames commemorating scientists of the past, whose contributions have been overlook…
meren updated
3 years ago
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#1434 updated the API for sim_mutations when dealing with adding to an existing set of mutations. The current system is pretty unsatisfactory though, because there's no guarantee that an error won't o…
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Using Python makes it easier to integrate the code in the rest of the workflow.
Also, this makes documentation easier using for example Jupyter Notebooks or Jupyter Books.
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### Main issue
**What is this request referring to?**
Many transposons are not included in the SO system. Please add them for a better catalog. For SO naming and relationships please refer to the tw…
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Plots for transposons from total RNA sequencing at 15 C
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To improve the processing of sequencing data, some python scripts need to be developed that allows for quick comparison of two datasets. This might show differences in the data processing done by me a…