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Hello,
Just a quick query on adapter dectection, there is smrtbell adapter which keep poping up in our dataset, and looking blasting it at ncbi, not only ours.
I would be nice if it was possibl…
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Hi,
I have downloaded latest freeTDS 1.4.17 and tried to connect to MSSQL 2016 by restricting TLS to use only TLS 1.3 both on MSSQL server side and on linux (client) side.
When I tried to connect …
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error running the processConservation
Hi Idan,
I have a problem when I run processConservation, I don't know how to resolve the error is :"Subroutine overlap redefined at scripts/Mapping.pm line 364…
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I am trying to run ```g2gtools extract``` with a g2gtools DB created from a GTF and a FASTA. It is running successfully but after 14 minutes it stops:
`2024-08-05T19:38:02.180415541Z GTTCCAATACTGTG…
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This recommendation was raised in the [review of the Poseidon paper](https://elifesciences.org/reviewed-preprints/98317v1/reviews#tab-content#tab-content).
> The BioSamples database (https://www.eb…
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**Versions**
```
conda env with python 3.8
poppunk v2.7.0
pp-sketchlib 2.1.3 (also tried 2.0.0)
```
**Command used and output returned**
```
poppunk_assign --db ../Haemophilus_influenzae_v2_…
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Building a microbial nt database I am currently getting this message `kmer found in sequence w/ taxid 1000315525 that is not in database` hundreds of time from 4 days.
On the htop I can see that is …
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**Is your feature request related to an existing issue or bug?**
Briefly reference any existing issues this is related to.
I run my file and got:
Traceback (most recent call last):
File "/opt/…
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Hello, I have a question about the ’extracted.filtered.fa‘ file in the output of stage_two . May I ask if the file contains complete ARG-carrying read or only a partial sequence (sequence cutoff) hit …
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https://wiki.flybase.org/wiki/FlyBase:Links_to_and_from_FlyBase#Links_from_FlyBase
Links from FlyBase
FlyBase supports linkouts from any FlyBase object that has a stable FlyBase ID (e.g. FBxx[0-…