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Hi,
I'm not getting any response on the [BioStars VG](https://www.biostars.org/p/9585526/#9585526) forum so figured i'd post here:
I'm aligning my reads to the reference graph using the same proce…
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### 🐛 Describe the bug
I'm trying to export the [ultralytics](https://github.com/ultralytics/ultralytics) YOLOv8 model using the CoreML backend, but I'm getting an error when saving the serialized …
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Can Cactus be used to align the list of CDS from several species? Impliying that none of the sequences will be masked.I've tried it and I got an error (below).
I thought it was a version problem, but…
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[Rui Martiniano and others](https://www.biorxiv.org/content/10.1101/782755v1) have shown that mapping aDNA reads to a variation graph can substantially reduce reference bias. It would be great if vg c…
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Hi,
I tried the program using the files in the example folder. The output is listed as follows. Is this something expected? How to interprete this output?
Thanks,
Hang
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Hi,
I'm attempting to run GraffiTE in GT-sv-GA mode, but I encounter an error during the execution of the graph_align_reads (41) process, as shown in the message below. (However, when I run this st…
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Hi @hanspi42,
I wanted to thank you for creating this very useful software.
I've encountered an issue that I'd like to report. When I open a saved graph on a different PC with a different monito…
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Hello, I'm curious about that is REGAL enable to deal with the graph alignment problem where there are different node amounts in two graphs. Thanks!
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May I ask whether the *.ul.ovlp.bin file and *.re.ul.ovlp.bin record the ul data Ultra-long-to-HiFi read alignments process and Ultra-long-to-HiFi graph respectively alignments process. What command c…
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See [Lee et al 2002](http://bioinformatics.oxfordjournals.org/content/18/3/452.short). This is the data structure that backs [SINA](http://www.arb-silva.de/aligner) and probably a few other aligners, …