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Hi, professor Ge.
I would like to express my sincere gratitude for the incredible analysis method you have developed. The functionality it offers is truly powerful, and I have greatly appreciated its…
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I may be misunderstanding, but is there a way to convert long sequences like chromosomes from hal to fasta or phylip multiple alignment formats? I've tried cactus-hal2maf and then various maf 2 fasta …
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Orphanet lists quite a few [ring chromosome syndromes](https://www.orpha.net/en/disease/classification/sibling/158293?orphaCode=363203&plus=1&search=Autosomal-trisomy&entry=98130&mode=name). In a revi…
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Hi, thanks for this great package - it's making our lives downstream much easier!
I've been using pybigtools' `BBIRead.values()`, which says it can read regions even if (partially) outside chromosome…
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Hi there, can monopogen handle chromosome X, especially in males? Is there a standard of practice? Thanks! -Xiaolin
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Hi,
I have a question about REGENIE v1.0.5.3. Can Step 1 run by splitting chromosomes such as inputting each chr bed file and output the .loco file for each chromosome?
Thanks a lot!
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This issue aims to model simulation agent parameters using a DNA and genes-inspired approach. By structuring agent parameters, such as “learning rate,” as genes within a genome, we can encode, decode,…
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I’m currently working on imputation for a merged cohort, but I’ve encountered repeated failures specifically with chromosome 9, and the cause isn’t clear. I’ve attached a text file with the relevant s…
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Dear Netanel and Tommy,
We have some EMseq data mapped to hs37d5, but ours is a version of hs37d5 without "chr" in the chromosome names. This is giving me problems with uxm. `wgbstools bam2pat` wo…
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### In which category is your new term request?
- [X] new_definition
- [ ] existing_definition
### Preferred term label
Autosome
### Synonyms
_No response_
### Synonym type
None
### Textual de…
ccaio updated
1 month ago