-
Hi,
thanks for the great software!
I encountered a new question about the enrichment results when using different combinations of LD scores.
Since the LD score of each category is independent(s…
-
Hi.
I appreciate your efforts to make this amazing tool.
I want to use ExAC database for detecting PM2.
But in InterVar, 1000g is default.
Can I add ExAC database? How?
I added "ex…
-
Hi Brent,
I would like to make annotated file of ExAC downloaded from [here](https://gnomad.broadinstitute.org/downloads)
`All chromosomes VCF
4.56 GiB, MD5: f2b57a6f0660a00e7550f62da2654948`
…
-
I setup wire server follow your guild. All step finished, no error!
Im current set cidraddress in metallb : 10.15.15.30 (for internal demo testing).
And i set host to above ip for list domain :
I…
-
ExAC now provides a site VCF that excludes TCGA samples. There is also a non-psych sites VCF.
We could probably merge all 3 in the provenance and add, e.g. AC_ntcga=...;AC_npsyc=...;
so that we don't …
-
The subset of ExAC release version 1 "ExAC_nonpsych.r1.sites.vep.vcf.gz" can't be downloaded from the FTP site.
zhq90 updated
6 years ago
-
Error in open.connection(con, "rb") : HTTP error 502.
Calls: fromJSON ... fromJSON_string -> parseJSON -> parse_con -> open -> open.connection
Execution halted
Is http://exac.hms.harvard.edu/rest…
-
Hello,
I am facing this issue of training termination exacly after the first epoch is reached 100%, here is what I am getting
![image](https://github.com/xiaoaoran/SemanticSTF/assets/13992604/…
-
I get the same error when parsing a vcf annotated with dbNSFP ( by snpSift )
I ran the following
```python
reader = vcf.Reader(open("file.vcf"))
for line in reader:
print(line)
…
dridk updated
4 years ago
-
ExAC allele counts and frequencies are already in the VEP cache. But we use the `ExAC_nonTCGA` VCF instead, minus a few known somatic variants related to hematopoietic clonal expansion. Figure out how…