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When trying to read in the output of spectronaut_report file, the column called "FG.ApexIonMobility" is not being imported with the rest of the data (the column seems to be dropped). Trying out the fo…
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OpenMS version: 2.6.0 binary installers
platform: ubuntu 16.04
I ran into this problem when I was processing Diapasef data.
I used Mobi-Dik to create the library.
OpenSwath run command is:
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hi Michael
Please forgive me for bringing this up again... In my defense: You said nothing is preventing users from converting .d folders to mzml and analyze diaPASEF data :)
I have tried a few …
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Reported by Jean-Michel Camadro and Laurent Lignières. In their test run, only about a third of the identified peptides could be quantified using FeatureFinderIdentification (FFId). In addition, the s…
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**Is your feature request related to a problem? Please describe.**
When I have an MS2 with ion mobility specified in the precursor area, its not propogated.
Just a small snippet of mzML:
```
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Regarding Code:
- https://github.com/Ion-Mobility/tock/tree/ion/boards/s32k144evb
- https://github.com/Ion-Mobility/tock/tree/ion/chips/s32k14x
S32K Boot Sequence
- POR -> Boot Rom -> .IVT -> R…
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Hi,
Can can I pull out m/z, retention time, charge, ion mobility and protein accession/name from a spectral phospho library created from the reviewed human uniprot database.
Best Kieran
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Since 9810f53ea6715d9d4b957cb4bdbd8cc57ae6fe the semantics of MSSpectrum::clear changed, now it will also clear all FloatDataArrays() including ion mobility when called with `false` which was not the …
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**- Upload your log file**
(If a log file hasn't been generated, go to the 'Run' tab in FragPipe, click 'Export Log', zip the resulting "log_[date_time].txt" file to avoid truncation, then attach the…
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I got skyline to be recognized thanks to another thread here (thank you!!) but I am getting this error when it tries to build the library. Interestingly I also get this error if I try and build the l…