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Hi,
Do you provide any resource for the list of mutational changes per clade?
In the dataset that is acquired with Nextclade CLI, `nextstrain/sars-cov-2/wuhan-hu-1`, there is this statement in R…
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Just spotted a KP.3 sublineage that has got S:Q52R defining mutation of JE.1.1.1 and much earlier of B.1.525 [see **https://github.com/cov-lineages/pango-designation/issues/4** (!!) ]
Defining muta…
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I'm looking over the revised manuscript. The new tree figure is a great improvement and is much easier to follow, particularly alongside the new description of the Algorithm and Concepts in the docume…
ms609 updated
1 month ago
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I was trying to carte lineage tree and calculate branch probabilities with mira.time.get_branch_probabilities using terminal cells detected from mira.time.find_terminal_cells. I got the error of "LinA…
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# Required information
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- Device vendor and model ->pixel 6
- Device codename (if known) -> oriole
- LineageOS device tree > couldn't find device tree but here the link for lineage builds https:/…
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Input of definitions and list of values can be found:
https://github.com/pha4ge/Wastewater_Contextual_Data_Specification/tree/main/Template
The following table combines the info from above and add…
edsu7 updated
1 month ago
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**Description**
**Sub-lineage of:** KP.2.3
**Earliest sequence:** 2024-6-20 – India (travel to USA, Washington state Airport), EPI_ISL_19229712
**Most recent sequence:** 2024-7-7 – India (travel to…
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Currently < 700 kbps(approx.) on *Debian (not trust)* Debian 12 GNOME *Pegasus* Virtual Machine Manager virtual machine while fiber optic connected.
Next time should use:
```bash
sudo time wayd…
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Looks like all the builds are failing this month's run
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### Background
NGB shall support visualisation of a lineage for a family of strains or reference genomes. Lineage is represented as a one-directional graph where nodes represent a strain (genome) and…