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MultiQC is available via Spack: https://packages.spack.io/package.html?name=py-multiqc
We document it here: https://multiqc.info/docs/getting_started/installation/#spack
However, the recipe is w…
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### Description of the bug
Hi,
I tested the pipeline using a cluster configured to use **Kubernetes**.
The multiqc is unable to find the `multiqc_config.yml`
### Command used and terminal ou…
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## Need
In order to make multiqc pick up the Sentieon Dedup metrics file containing the PERCENT_DUPLICATES I had to trick it that it was a report from picard markduplicates (which produce a similar…
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I have been playing a little with MultiQC. It could be used as the reporting framework.
On the plus side, it has a lot of really nice features
- Interactive graphs
- File discovery based on [name](ht…
jfear updated
8 years ago
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First of all, thank for your nice pipeline.
Recently, I got an error in the part of multiqc analylsis, the codes showing below:
MissingOutputException in line 377 of /home/xiaoli/31_snakemake/ci…
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### Description of bug
Hi,
when I use the multiqc to summarize the results of qc. I noticed that there some results are omitted due to the word "of" in the samples' name. how to solve this prob…
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### Description of bug
Hi @ewels and @vladsavelyev
I am not sure if this is a bug or a question - I thought I will put it in the bug category so that it gets looked into asap :)
- I could not…
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See job: https://platform.dnanexus.com/panx/projects/GgJ3gf04F80JY20Gjkp0QjF4/monitor/job/GjPykg84F80BB23Fx1gJ8Bgv
Logs contain the line below:
`No MultiQC report given, searching instead with pat…
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Does `TidyMultiqc` supports the new json format on `MultiQC` version `1.20` (multiqc/megaqc#519)?
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MultiQC doesn't appear to run in the current state of the conda environment from the yaml file. Attempting to run on a minimal dataset (2 samples) throws 'SyntaxError: future feature annotations is no…