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```[tasklist]
### Tasks
- [ ] Add Pedigree information to our patched products
- [ ] Verify that product SBOMs are correct in that they e.g. list hadoop as the product and not hadoop-common or simi…
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Hi,
I wonder if the latest CRAN version of kinship2 introduced a bug affecting alignment in some cases.
Below is an example shown both versions.
Any idea what's going on? A fix would be much a…
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Hi there,
I've found this package really useful! I especially love the pedigree plots, and was able to use this package along with plotly to make an interactive plot for personal use. I would love …
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Hello, this a great visual tool for family history, especially for cancer research. I'm new to FHIR so maybe I'm asking a dumb question. I exported my pedigree diagram, and the data looks to be in jso…
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Hi,
Does shapeit4 utilize relatedness in haplotype phasing as shapeit2 does (duohmm)? Since shapeit4 use vcf inputs, I assume a 'no'. So how does it be more accurate than the previous version?
S…
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I'd like to make a new pipeline that uses pedigree information. Genotype estimates of parents and offspring will iteratively influence genotype priors of parents and offspring. Even for biparental p…
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Should we make `parents` a reserved dimension name? The size could be specified as "The number of unique parental categories used in the VCF header". So the following header lines would correspond to…
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Probably related to #101.
By reading the documentation of SnpEff & SnpSift:
https://pcingola.github.io/SnpEff/examples/
By the way, **I strongly recommend writing such a tutorial before any new…
ysard updated
2 years ago
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@gregorgorjanc
Even with the description, the double brackets in documentation (e.g. ``pedigree [PEDIGREE [PEDIGREE ...]]``) are still confusing. I suggest we just remove the original double brack…
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Expected Behavior
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Purdy pedigree is a notation system for describing pedigree trees that can vary in detail/length based o…