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An example to run a gene-cluster simulation without actin is:
python run_single_shoebox.py -b 11 -r 1 -t 10 -o gene_cluster/ -m 1 -c Control -p 3 -a 30 -x 80 -z 0 -n 0.01
where:
- a: activation…
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Hi I have problems with the promoter_test that gives me this error
*************** Promoter Test ****************
*** Input RNA sequence: /home/bioinfo/rgtdata/Loc100420879/Loc100420879.fasta
***…
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Currently only group owners/promoters can set the admin title of another admin in the chat, Can a permission be added on the list of permissions for admins to allow them to set their own title.
Giv…
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Taks for promoter QA:
- Can sign into the site
- Can see a list of their plans
- Can create a new plan
- Can add collaborators to a plan
- Can add operational periods
- Can add multiple assets
- Can a…
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We're in 20 regions*
* 19 fully deployed at the moment following https://github.com/kubernetes/registry.k8s.io/issues/234
We should evaluate expanding to remaining regions, further reducing the …
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## Problem
Looks pretty good but what happens when you call the setter on an account managed by stripe or vice versa? e.g. it might be dangerous to have a promoter create a user and manage it but n…
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protein_miRNA_promoter_binding is asserted as a subclass of binding, which is a subclass of function.
The logical definition says: protein_miRNA_promoter_binding subClassOf (precedes some miRNA_transc…
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### Description of feature
Retrieve transcription start sites for genes for use with ATAC data.
This could be similar to the `GenomicFeatures::promoters` function (description available [in this v…
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Those files are bigBed instead of bigWig?
And one question tho is that what are those files? Predicted cell-specific enhancers and promoters from PLAC-seq?
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Thanks for a great easy to use tool. I've finally reached the step where I would like to do a Gene Centric Noncoding conditional analysis on some select rare variants I identified in my data set.
As…