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Filing an overdue issue for this previously discussed enhancement. See early work by @jj-umn as part of Galaxy-P on this branch (checked in by @jmchilton): https://bitbucket.org/galaxyp/galaxyp-toolsh…
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One assay is reported for all fractions. This does not allow to model fractionated design with channel swaps between fractions (though I don't know how relevant this is).
Example: consider Assay 1 (A…
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Hi, thanks for the great project. I'm attempting to load the latest Unimod XML file into Postgres using pyteomics and have encountered a few errors that I've attempted to solve along the way. I've doc…
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Add a "decoy" flag here:
https://github.com/OpenMS/OpenMS/blob/develop/src/openms/source/FORMAT/MascotGenericFile.cpp#L85
and then probably here check if it is set:
https://github.com/OpenMS/…
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![image](https://user-images.githubusercontent.com/92912854/138231668-7cd72974-358b-4f90-919f-23f4bbb22626.png)
please have a look at attached image ,help to solve the problem
search gui error sh…
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I want to open this up as a discussion outside of the coming pull request. I'm excited for the coming functionality, and I don't want to slow that down.
Making "proteoform hypothesis" a more formal…
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hi Michael
Please forgive me for bringing this up again... In my defense: You said nothing is preventing users from converting .d folders to mzml and analyze diaPASEF data :)
I have tried a few …
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Currently, database doesn't seem to pull papers based on author(s) e.g.
```bash
python query_data.py "Do you know of any papers authored by Edward Yang?"
```
```output
Response: Yes, based on …
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The current msp and other spectral library formats only capture the metadata around each entry in the library (cluster, consensus spectra, peptides, small molecules), but not the way the spectral libr…