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topdownproteomics
/
sdk
Software solution for common top-down proteomics tasks
http://www.topdownproteomics.org/
MIT License
9
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4
forks
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Negative Mode and Charge Carriers
#114
rfellers
closed
3 months ago
1
TopPic Proforma Parser
#113
mikehollas123
closed
5 months ago
1
Proteoform Modification Evidence
#112
rfellers
closed
6 months ago
1
Mercury7 High Pruning Limit
#111
rfellers
closed
6 months ago
1
Update action versions
#110
acesnik
closed
1 year ago
0
Descriptor value for RESID
#109
rfellers
closed
1 year ago
2
Fix to RESID ProForma writing
#108
mtrobey
closed
1 year ago
1
UniProt XML, FASTA parsers?
#107
acesnik
opened
1 year ago
2
Chemical Formula Improvements
#106
rfellers
closed
1 year ago
0
Full v2 Spec + Proteoform Level Implementation by zrolfs
#105
rfellers
closed
1 year ago
10
Concrete Chemical Formula
#104
rfellers
closed
1 year ago
5
test codecov
#103
acesnik
closed
1 year ago
1
update codecov stuff
#102
acesnik
closed
1 year ago
1
update codecov stuff
#101
acesnik
closed
1 year ago
2
Better Fixed Isotope handling
#100
rfellers
closed
1 year ago
0
Update codecov uploader
#99
acesnik
closed
1 year ago
0
Improve formula and composition writing
#98
rfellers
closed
1 year ago
0
Glycan compositions
#97
rfellers
closed
1 year ago
0
Dual Target
#96
rfellers
closed
1 year ago
0
N-term check, upper Unimod on writing and parsing
#95
joseph-greer
closed
2 years ago
1
Add codecov step in build
#94
acesnik
closed
2 years ago
2
Update release.yml
#93
rfellers
closed
2 years ago
0
Update dotnet.yml
#92
rfellers
closed
2 years ago
0
Small usability changes
#91
rfellers
closed
2 years ago
0
loosens requirement for protein detection protocol
#90
mtrobey
closed
2 years ago
0
MzIdentML Parser Improvements
#89
mtrobey
closed
2 years ago
0
Fixing nuget push command
#88
acesnik
closed
3 years ago
1
Remove AppVeyor badge & add back changes to release.yml that got lost
#87
acesnik
closed
3 years ago
1
Create basic GitHub Actions build without nuget packaging & release action with publishing to NuGet
#86
acesnik
closed
3 years ago
2
Fixing continuous builds
#85
acesnik
closed
3 years ago
0
Add Sequence Ambiguity and Proteoform Classification
#84
zrolfs
closed
1 year ago
14
XlMod lookup
#83
rfellers
closed
3 years ago
0
Mass Descriptors to standardize on 4 decimal places
#82
rfellers
closed
3 years ago
0
Mod Name Lookup + Hash Mass
#81
rfellers
closed
3 years ago
0
Handle multiple origins on single PSI-MOD term
#80
rfellers
closed
3 years ago
0
PSI-MOD Remap
#79
rfellers
closed
3 years ago
0
Handle Zeros in Chemical Formulas
#78
rfellers
closed
3 years ago
0
Proteoform Group Ambiguity
#77
rfellers
closed
3 years ago
0
ptmlist parse fix
#76
rfellers
closed
3 years ago
0
Proteoform Hash Changes
#75
rfellers
closed
3 years ago
0
Adds mzIdentML parser
#74
mtrobey
closed
3 years ago
1
ProForma Writer fixes for v2
#73
rfellers
closed
3 years ago
1
Inter-Chain Crosslinks
#72
rfellers
opened
3 years ago
0
Proforma v2 from HUPO-PSI
#71
rfellers
closed
3 years ago
6
OBO based PSI-MOD parser
#70
rfellers
closed
4 years ago
0
Formal Charge Mass Calculation
#69
rfellers
closed
4 years ago
0
Expanded the scope of the Modification Lookup tests for Unimod and Un…
#68
b-early
closed
4 years ago
0
Removed part of a test that was failing. The functionality is tested…
#67
b-early
closed
4 years ago
0
Isotopes
#66
b-early
closed
4 years ago
0
Fixed a bug in the InMemoryElementProvider and added some tests.
#65
b-early
closed
4 years ago
0
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