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Dear snp-sites developers,
I am following the workflow suggested by the snippy GitHub (https://github.com/tseemann/snippy) to make a core SNP tree after gubbins has identified recombinant sites. I…
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Locus breaker identified 41 loci for 40 proteins in which the boundaries' of the locus were the same.
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dbt-core version is 1.8.5
dbt-fabric version is 1.8.7
When running `dbt snapshot` against a Fabric warehouse, we are seeing the following error:
`('42000', '[42000] [Microsoft][ODBC Driver 18 for…
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Hi! Thank you for this new program! Could you explain me why I get the error "sorry, Dude. Didn't generate enough snps." during preprocessing?
The error occurs using the function `sample_ts` with …
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### Describe the bug
fetch_vcek_from_kds is a fallback mechanism when extended guest requests fail to provide a cached VCEK certificate to the guest. The solution in PR #555 hardcodes "Milan" in the …
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Hello, we would like to analyze SNPs under selection across different populations (in our case, we have six), and the sample sizes (belove) provided are just examples. Unfortunately, we keep encounter…
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In the Step 5 - Single Nucleotide Variant calling cell by cell,
Could you tell me what the role of the SNPs descriptor file is?
Does it is the SNP calling results at the overall sample level, or is…
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Hi Jody
I ran this "cat samples.txt | parallel --bar -j 2 tb-profiler profile -1 {}_R1.fastq.gz -2 {}_R2.fastq.gz -p {} --txt --call_whole_genome --snp_dist 200" and I got this message
[R16787_lib1…
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I have an AMD EPYC 8024P and I'm having issues starting SEV, SEV-ES, and SEV-SNP. I've enabled SEV-SNP in BIOS, set the ASIDs appropriately (256 out of 1006), and enabled SMEE.
However, I still don…
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I could follow the [Bare metal setup][1] without any issues on a newly installed Ubuntu 24.10 system (with Linux 6.11 containing the SNP Host patches) without issues:
AFAIK I enabled SNP correctly…