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Hello,
Kind of a weird 'issue' as it's more a 'forum like' topic.
I am completely new to JSDMs and have some questions about some thoughts I had about how to use them.
For instance :
- How i…
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...to get directly to data downloads in various formats
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Hi,
I tried running lotus2 but got the following error:
This is sdm (simple demultiplexer) 2.17 beta.
Checking for switched pairs.
Run with 12 cores.At lotus2/SRR13436190_1.fastq:
Undecided f…
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Cross link to #672
There has been much discussion about a ``microbiome`` class, the latest being in #805.
Resulting from [pco/issues/22](https://github.com/PopulationAndCommunityOntology/pco/iss…
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Thanks for making this great tool! I have a clarifying question I haven't been able to find an answer to. How does EMU handle novel species?
For example, I'm working with soil microbiomes that hav…
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**Proposed Behavior**
The question is: how to bin? The user could define:
1. an explicit number of bins to create, and the range of values are sliced at even intervals
2. a "step" size to explici…
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Thanks for posting this public rebuttal! Good science is open science.
There's been some suggestion that removing environmental contaminants, as done in the original paper, removes the cancer sub-t…
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**Describe the bug**
In the symbiont-associated package in consideration for v6.0, the use of the term "symbiont" appears to be unclear and inconsistent.
@ramonawalls @pyilmaz @lschriml @only1ch…
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### Branch
g1.04-contentTypes
g1.04-studyExperimentField
### Groups
Group 1 - Content Types | Ontology | Fields
### Describe
We will want to start our own Entity Type + field collectio…
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Hello Xiyu,
When I was running AmpliCI and pool all samples, It worked for a small dataset close to 9,000,000 but this error for 60,000,000:
/var/slurm/spool/slurmd/job40856275/slurm_script: li…