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This tool looks great and I can't wait to use it!
Unfortunately, I am having a problem with file formatting or transfer. I am loading ImmunoSeq TCRB data files (.TSV) using the repLoad function but…
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Hello,
tcrdist3 is a wonderful tool!
I ran into an issue with running Radius with my own data.
My command : tr.clone_df['neighbors'] = _neighbors_variable_radius(
pwmat = tr.pw_beta,
…
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Hi
I need your personal point of view please
I have two `bulk RNA-seq` patients (PBMC) on which I run `mixcr`
For the same two patients I have `5' single cell` on which I run `TRUST4`
I a…
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Hi there, thank you for the great and detailed package!
I was wondering if you could help me resolve an error with the pipeline where the process is killed before STAR alignment is finished. I am r…
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Hi
Thanks for your software I do not know why I am not able to merge my metadata
I should mention that my two Bulk samples are output of `micxr` and my two sc(single cell) samples are output of …
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Hi Quentin,
I've been playing around with IGoR a bit after having read the paper and I'm wondering if you can give some suggestions about how to go through the process of estimating Pgen for small …
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dear mikhail,
great program! we would love to try this out in our data sets. however, it seems like the advanced pipeline from the preprint did not make it into the released version yet? could you …
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Hi
Please help me in getting to load 10x data
```
> immdata_10x
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Hi there,
I am working on 10X scTCR data lately. Here I got a problem, after I loaded my 10X data into immunarch, it would store paired info (alpha and beta chain) like the picture blow
![paired i…
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## 🐛 Bug
Hi,
Thanks so much for this amazing tool, it's been really helpful in analyzing TCR data.
I have been using Immunarch without a problem with previous versions of Mixcr.
However, ever…